Serveur d'exploration sur l'opéra

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

STUDIES ON ULTRASTRUCTURE AND THREE‐GENE PHYLOGENY OF THE GENUS MALLOMONAS (SYNUROPHYCEAE)

Identifieur interne : 000B57 ( Main/Exploration ); précédent : 000B56; suivant : 000B58

STUDIES ON ULTRASTRUCTURE AND THREE‐GENE PHYLOGENY OF THE GENUS MALLOMONAS (SYNUROPHYCEAE)

Auteurs : Bok Yeon Jo [Corée du Sud] ; Woongghi Shin [Corée du Sud] ; Sung Min Boo [Corée du Sud] ; Han Soon Kim [Corée du Sud] ; Peter A. Siver [États-Unis]

Source :

RBID : ISTEX:D8A97BAC2581FE5E1D768655351EDB117422B6D5

English descriptors

Abstract

The genus Mallomonas, a common and often abundant member of the planktic community in many freshwater habitats worldwide, consists of 180 species divided into 19 sections and 23 series. Classification of species is based largely on ultrastructural characteristics of the siliceous scales and bristles that collectively form a highly organized covering over the cell. However, the relative importance of the different siliceous features of the scales, such as the dome, V rib, and secondary structures, as well as the different types of scales, in understanding the evolution and phylogeny of the genus is little known. In this study, we investigated the scale and bristle ultrastructure, along with sequences of three genes, for 19 isolates (18 species) of Mallomonas (18 isolates were from Korean habitats). The isolates represented nine of the 19 sections. Sequences for both the nuclear SSU and LSU rDNA and plastid LSU of RUBISCO (rbcL) genes for each of the 19 Mallomonas isolates and four outgroups were determined. Bayesian and maximum‐likelihood (ML) analyses of the data revealed that Mallomonas consists of two strongly supported clades. Mallomonas bangladeshica (E. Takah. et T. Hayak.) Siver et A. P. Wolfe was at the base of the first clade that included taxa from the sections Planae and Heterospinae, both of which lack a V rib on the shield of the scales. Our results indicated that the sections Planae and Heterospinae should be combined. The second clade, with Mallomonas insignis Penard and Mallomonas punctifera Korshikov at the base, contained taxa from the sections Mallomonas, Striatae, Akrokomae, Annulatae, Torquatae, Punctiferae, and Insignes, all of which have V ribs or well‐developed marginal ribs on the scales. Sister relationships between Mallomonas and Striatae were strongly supported, but interrelations among the remaining sections were not resolved, probably due to inclusion of too few species. Our results suggest that the current classification of the genus Mallomonas at the section level will require some revision. Additional species will need to be added in future analyses.

Url:
DOI: 10.1111/j.1529-8817.2010.00953.x


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI wicri:istexFullTextTei="biblStruct">
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">STUDIES ON ULTRASTRUCTURE AND THREE‐GENE PHYLOGENY OF THE GENUS MALLOMONAS (SYNUROPHYCEAE)</title>
<author>
<name sortKey="Jo, Bok Yeon" sort="Jo, Bok Yeon" uniqKey="Jo B" first="Bok Yeon" last="Jo">Bok Yeon Jo</name>
</author>
<author>
<name sortKey="Shin, Woongghi" sort="Shin, Woongghi" uniqKey="Shin W" first="Woongghi" last="Shin">Woongghi Shin</name>
</author>
<author>
<name sortKey="Boo, Sung Min" sort="Boo, Sung Min" uniqKey="Boo S" first="Sung Min" last="Boo">Sung Min Boo</name>
</author>
<author>
<name sortKey="Kim, Han Soon" sort="Kim, Han Soon" uniqKey="Kim H" first="Han Soon" last="Kim">Han Soon Kim</name>
</author>
<author>
<name sortKey="Siver, Peter A" sort="Siver, Peter A" uniqKey="Siver P" first="Peter A." last="Siver">Peter A. Siver</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:D8A97BAC2581FE5E1D768655351EDB117422B6D5</idno>
<date when="2011" year="2011">2011</date>
<idno type="doi">10.1111/j.1529-8817.2010.00953.x</idno>
<idno type="url">https://api.istex.fr/document/D8A97BAC2581FE5E1D768655351EDB117422B6D5/fulltext/pdf</idno>
<idno type="wicri:Area/Istex/Corpus">001C16</idno>
<idno type="wicri:Area/Istex/Curation">001C16</idno>
<idno type="wicri:Area/Istex/Checkpoint">000112</idno>
<idno type="wicri:doubleKey">0022-3646:2011:Jo B:studies:on:ultrastructure</idno>
<idno type="wicri:Area/Main/Merge">000B57</idno>
<idno type="wicri:Area/Main/Curation">000B57</idno>
<idno type="wicri:Area/Main/Exploration">000B57</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title level="a" type="main" xml:lang="en">STUDIES ON ULTRASTRUCTURE AND THREE‐GENE PHYLOGENY OF THE GENUS MALLOMONAS (SYNUROPHYCEAE)</title>
<author>
<name sortKey="Jo, Bok Yeon" sort="Jo, Bok Yeon" uniqKey="Jo B" first="Bok Yeon" last="Jo">Bok Yeon Jo</name>
<affiliation wicri:level="1">
<country xml:lang="fr">Corée du Sud</country>
<wicri:regionArea>Department of Biology, Chungnam National University, Daejeon 305‐764</wicri:regionArea>
<wicri:noRegion>Daejeon 305‐764</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Shin, Woongghi" sort="Shin, Woongghi" uniqKey="Shin W" first="Woongghi" last="Shin">Woongghi Shin</name>
<affiliation wicri:level="1">
<country xml:lang="fr">Corée du Sud</country>
<wicri:regionArea>Department of Biology, Chungnam National University, Daejeon 305‐764</wicri:regionArea>
<wicri:noRegion>Daejeon 305‐764</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Boo, Sung Min" sort="Boo, Sung Min" uniqKey="Boo S" first="Sung Min" last="Boo">Sung Min Boo</name>
<affiliation wicri:level="1">
<country xml:lang="fr">Corée du Sud</country>
<wicri:regionArea>Department of Biology, Chungnam National University, Daejeon 305‐764</wicri:regionArea>
<wicri:noRegion>Daejeon 305‐764</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Kim, Han Soon" sort="Kim, Han Soon" uniqKey="Kim H" first="Han Soon" last="Kim">Han Soon Kim</name>
<affiliation wicri:level="1">
<country xml:lang="fr">Corée du Sud</country>
<wicri:regionArea>Department of Biology, Kyungpook National University, Daegu 702‐701</wicri:regionArea>
<wicri:noRegion>Daegu 702‐701</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Siver, Peter A" sort="Siver, Peter A" uniqKey="Siver P" first="Peter A." last="Siver">Peter A. Siver</name>
<affiliation wicri:level="1">
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Botany, Connecticut College, New London, Connecticut 06320</wicri:regionArea>
<wicri:noRegion>Connecticut 06320</wicri:noRegion>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series>
<title level="j">Journal of Phycology</title>
<idno type="ISSN">0022-3646</idno>
<idno type="eISSN">1529-8817</idno>
<imprint>
<publisher>Blackwell Publishing Ltd</publisher>
<pubPlace>Oxford, UK</pubPlace>
<date type="published" when="2011-04">2011-04</date>
<biblScope unit="volume">47</biblScope>
<biblScope unit="issue">2</biblScope>
<biblScope unit="page" from="415">415</biblScope>
<biblScope unit="page" to="425">425</biblScope>
</imprint>
<idno type="ISSN">0022-3646</idno>
</series>
<idno type="istex">D8A97BAC2581FE5E1D768655351EDB117422B6D5</idno>
<idno type="DOI">10.1111/j.1529-8817.2010.00953.x</idno>
<idno type="ArticleID">JPY953</idno>
</biblStruct>
</sourceDesc>
<seriesStmt>
<idno type="ISSN">0022-3646</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Mallomonas</term>
<term>Synurophyceae</term>
<term>phylogeny</term>
<term>rbcL</term>
<term>ribosomal DNA</term>
<term>ultrastructure</term>
</keywords>
</textClass>
<langUsage>
<language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">The genus Mallomonas, a common and often abundant member of the planktic community in many freshwater habitats worldwide, consists of 180 species divided into 19 sections and 23 series. Classification of species is based largely on ultrastructural characteristics of the siliceous scales and bristles that collectively form a highly organized covering over the cell. However, the relative importance of the different siliceous features of the scales, such as the dome, V rib, and secondary structures, as well as the different types of scales, in understanding the evolution and phylogeny of the genus is little known. In this study, we investigated the scale and bristle ultrastructure, along with sequences of three genes, for 19 isolates (18 species) of Mallomonas (18 isolates were from Korean habitats). The isolates represented nine of the 19 sections. Sequences for both the nuclear SSU and LSU rDNA and plastid LSU of RUBISCO (rbcL) genes for each of the 19 Mallomonas isolates and four outgroups were determined. Bayesian and maximum‐likelihood (ML) analyses of the data revealed that Mallomonas consists of two strongly supported clades. Mallomonas bangladeshica (E. Takah. et T. Hayak.) Siver et A. P. Wolfe was at the base of the first clade that included taxa from the sections Planae and Heterospinae, both of which lack a V rib on the shield of the scales. Our results indicated that the sections Planae and Heterospinae should be combined. The second clade, with Mallomonas insignis Penard and Mallomonas punctifera Korshikov at the base, contained taxa from the sections Mallomonas, Striatae, Akrokomae, Annulatae, Torquatae, Punctiferae, and Insignes, all of which have V ribs or well‐developed marginal ribs on the scales. Sister relationships between Mallomonas and Striatae were strongly supported, but interrelations among the remaining sections were not resolved, probably due to inclusion of too few species. Our results suggest that the current classification of the genus Mallomonas at the section level will require some revision. Additional species will need to be added in future analyses.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Corée du Sud</li>
<li>États-Unis</li>
</country>
</list>
<tree>
<country name="Corée du Sud">
<noRegion>
<name sortKey="Jo, Bok Yeon" sort="Jo, Bok Yeon" uniqKey="Jo B" first="Bok Yeon" last="Jo">Bok Yeon Jo</name>
</noRegion>
<name sortKey="Boo, Sung Min" sort="Boo, Sung Min" uniqKey="Boo S" first="Sung Min" last="Boo">Sung Min Boo</name>
<name sortKey="Kim, Han Soon" sort="Kim, Han Soon" uniqKey="Kim H" first="Han Soon" last="Kim">Han Soon Kim</name>
<name sortKey="Shin, Woongghi" sort="Shin, Woongghi" uniqKey="Shin W" first="Woongghi" last="Shin">Woongghi Shin</name>
</country>
<country name="États-Unis">
<noRegion>
<name sortKey="Siver, Peter A" sort="Siver, Peter A" uniqKey="Siver P" first="Peter A." last="Siver">Peter A. Siver</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Musique/explor/OperaV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000B57 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000B57 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Musique
   |area=    OperaV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     ISTEX:D8A97BAC2581FE5E1D768655351EDB117422B6D5
   |texte=   STUDIES ON ULTRASTRUCTURE AND THREE‐GENE PHYLOGENY OF THE GENUS MALLOMONAS (SYNUROPHYCEAE)
}}

Wicri

This area was generated with Dilib version V0.6.21.
Data generation: Thu Apr 14 14:59:05 2016. Site generation: Thu Jan 4 23:09:23 2024